STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE49042.1DNA-binding transcriptional regulator, GntR family. (235 aa)    
Predicted Functional Partners:
SDE20323.1
DNA-binding transcriptional regulator, GntR family.
  
     0.764
SDE81762.1
DNA-binding transcriptional regulator, GntR family.
  
     0.746
SDD66501.1
beta-N-acetylhexosaminidase.
   
  0.719
SDE49070.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
    
 0.578
SDE49127.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
     0.495
SDE47185.1
Acetolactate synthase, small subunit.
   
    0.448
SDE49099.1
UDP-glucose 4-epimerase.
       0.439
SDF01823.1
Urea carboxylase.
       0.430
SDE49184.1
Putative tricarboxylic transport membrane protein.
 
     0.403
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.