STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE50939.1ATP-binding cassette, subfamily B. (594 aa)    
Predicted Functional Partners:
SDE50999.1
Leucine carboxyl methyltransferase.
 
     0.924
SDE15927.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.897
SDD94833.1
Putative spermidine/putrescine transport system ATP-binding protein/spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.891
SDE16092.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.881
SDE50968.1
ATP-binding cassette, subfamily B.
 
    
0.821
SDE51055.1
Pesticin/yersiniabactin receptor.
 
     0.723
SDD62244.1
ATP-binding cassette, subfamily B.
  
 
0.679
SDE86412.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase.
  
     0.671
SDE86386.1
Hypothetical protein.
  
 
   0.663
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.652
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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