STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE45684.1Phage tail-collar fibre protein. (433 aa)    
Predicted Functional Partners:
SDE45738.1
Hypothetical protein.
 
  
 0.995
SDF05066.1
Phage tail protein, P2 protein I family.
 
  
 0.995
SDE45869.1
Hypothetical protein.
 
  
 0.994
SDE45890.1
Hypothetical protein.
 
  
 0.994
SDE45766.1
Hypothetical protein.
 
  
 0.994
SDF05034.1
Baseplate J-like protein.
 
  
 0.992
SDF04998.1
Hypothetical protein.
 
  
 0.991
SDF04928.1
Phage baseplate assembly protein V.
 
  
 0.989
SDE93218.1
Phage terminase, large subunit GpA.
 
  
 0.979
SDF04692.1
P2-like prophage tail protein X.
  
    0.965
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.