STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE57706.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
SDE57679.1
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.608
SDE57632.1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7.
       0.607
lgt
Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.604
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
       0.597
SDE05144.1
Hypothetical protein.
  
     0.546
SDD80565.1
Lipopolysaccharide export system protein LptA.
  
     0.488
SDE26238.1
Hypothetical protein.
  
     0.481
SDD83011.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.477
SDE69469.1
COQ9 protein.
  
     0.468
SDE79207.1
Protein of unknown function.
  
     0.468
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
Server load: low (26%) [HD]