STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE54796.1Thiosulfate/3-mercaptopyruvate sulfurtransferase. (284 aa)    
Predicted Functional Partners:
SDE54767.1
Cysteine synthase A.
  
 
 0.949
SDE54883.1
Cystathionine beta-lyase.
 
 
 0.940
SDE11413.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.885
SDD96415.1
Cysteine desulfurase.
   
 0.845
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.836
SDE63558.1
Cysteine synthase A.
  
 
 0.835
SDE40494.1
Sulfur-oxidizing protein SoxY.
     
 0.818
SDE40519.1
Sulfur-oxidizing protein SoxZ.
     
 0.818
SDD69988.1
Aspartate aminotransferase.
     
 0.812
SDE30556.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
    
  0.812
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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