STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE61817.1Peptide/nickel transport system ATP-binding protein/dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (290 aa)    
Predicted Functional Partners:
SDE61757.1
Peptide/nickel transport system permease protein.
 
 0.999
SDE61735.1
Peptide/nickel transport system permease protein.
 
 0.997
SDE15875.1
Peptide/nickel transport system permease protein.
 
 0.988
SDE89188.1
Peptide/nickel transport system permease protein.
 
 0.988
SDE31294.1
Peptide/nickel transport system permease protein.
 
 0.980
SDE71939.1
Peptide/nickel transport system permease protein.
 
 0.978
SDD80066.1
Cobalt/nickel transport system permease protein.
  
 0.965
SDE61788.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.919
SDE15901.1
Peptide/nickel transport system permease protein.
 
 0.898
SDE96959.1
ATP-binding cassette, subfamily C, CydD.
 
 
   
0.893
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.