STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE63286.1Methionine biosynthesis protein MetW. (222 aa)    
Predicted Functional Partners:
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
  
 0.998
SDE46762.1
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
  
 0.985
SDE63310.1
Hypothetical protein.
       0.773
SDE63233.1
Chorismate mutase domain-containing protein.
       0.628
SDE63189.1
Cyclohexadieny/prephenate dehydrogenase.
 
     0.579
SDE48150.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
    
 0.566
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
     0.538
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.522
SDE63333.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
       0.465
SDD70442.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
     
 0.459
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.