STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE63759.1Hemerythrin. (142 aa)    
Predicted Functional Partners:
SDF02443.1
Two-component response regulator, FixJ family, consists of REC and HTH domains.
    
  0.848
SDE81010.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.817
SDE08372.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.800
SDE82758.1
PAS fold-containing protein.
    
  0.776
SDE47433.1
PAS domain S-box-containing protein.
    
  0.775
SDE83149.1
PAS domain S-box-containing protein.
    
  0.775
SDE06001.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.773
SDD66762.1
PAS domain S-box-containing protein.
    
  0.605
SDD79497.1
PAS domain-containing protein.
    
  0.605
SDD80004.1
PAS domain S-box-containing protein.
    
  0.590
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.