STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE70969.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
SDE70915.1
dnaA protein; Belongs to the DnaA family.
       0.841
SDE70945.1
Cardiolipin synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.841
SDD62058.1
Osmotically-inducible protein OsmY, contains BON domain.
  
     0.766
SDE41995.1
Hypothetical protein.
  
     0.761
SDD91945.1
Hypothetical protein.
  
     0.750
SDE82537.1
FliJ protein.
  
     0.745
SDE18586.1
Outer membrane protein OmpU.
  
     0.736
SDE18559.1
Outer membrane protein OmpU.
  
     0.736
SDE19159.1
Protein of unknown function.
  
     0.728
SDE55678.1
Rod shape-determining protein MreD.
  
     0.721
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.