STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE68231.1Phosphatidylglycerophosphatase A. (215 aa)    
Predicted Functional Partners:
SDE70945.1
Cardiolipin synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.884
SDE32178.1
Cardiolipin synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.877
SDE68256.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
       0.841
SDE68285.1
23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
    0.775
SDD75460.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.636
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.626
SDE50527.1
PAP2 superfamily protein.
  
 
 0.610
SDE48150.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
     
 0.592
SDE50152.1
Phosphoserine phosphatase.
    
 0.577
SDE68200.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
       0.542
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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