STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE75636.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
SDE69134.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.884
SDE75659.1
Uncharacterized domain 1-containing protein.
 
     0.677
SDF12810.1
T5SS/PEP-CTERM-associated repeat-containing protein.
  
     0.479
SDF13074.1
T5SS/PEP-CTERM-associated repeat-containing protein.
  
     0.477
SDE15789.1
YfdX protein.
   
  
 0.469
SDE75685.1
DNA-binding transcriptional regulator, AcrR family.
       0.424
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.