STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE77758.1Methyltransferase domain-containing protein. (229 aa)    
Predicted Functional Partners:
SDE77677.1
Phosphonate transport system substrate-binding protein.
 
     0.687
phnC-2
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
       0.668
SDE77734.1
Phosphonate transport system permease protein.
       0.668
SDE48150.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
  
 
 0.568
SDD70442.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
     
 0.459
SDE47994.1
Sarcosine/dimethylglycine N-methyltransferase.
   
0.437
SDD70496.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
     
 0.432
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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