STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE78005.1Protein of unknown function. (1333 aa)    
Predicted Functional Partners:
SDE77940.1
VWA domain containing CoxE-like protein.
 
   
 0.905
SDE77911.1
Hypothetical protein.
 
    0.903
SDE77892.1
MoxR-like ATPase.
 
    0.900
SDE78030.1
Protein of unknown function.
 
    
0.738
SDD90058.1
RNA polymerase sigma-70 factor, ECF subfamily.
    
   0.701
SDE48354.1
RNA polymerase sigma-70 factor, ECF subfamily.
    
   0.701
SDE74507.1
Putative Ig domain-containing protein.
  
 
 
 0.626
SDE77977.1
Hypothetical protein.
       0.585
SDE49355.1
Hypothetical protein.
    
 
 0.573
SDE75125.1
T1SS-143 domain-containing protein.
    
 
 0.573
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.