STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE90249.1Dolichol-phosphate mannosyltransferase. (249 aa)    
Predicted Functional Partners:
SDE83196.1
Dolichol-phosphate mannosyltransferase.
 
 
 0.962
SDE89708.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.850
SDE90277.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.842
SDE90188.1
Nucleoside-diphosphate-sugar epimerase.
 
 
  0.825
SDE90219.1
Acetyltransferase (GNAT) family protein.
       0.773
SDD62556.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 0.755
SDE90391.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.698
SDE90358.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.638
SDE90070.1
Lipopolysaccharide transport system ATP-binding protein.
 
  
 0.622
SDE90330.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
  0.609
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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