STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE90680.1Methyltransferase domain-containing protein. (217 aa)    
Predicted Functional Partners:
SDE90500.1
Methyltransferase domain-containing protein.
   
  0.725
SDE90619.1
Hypothetical protein.
  
    0.724
SDE90589.1
Asparagine synthase (glutamine-hydrolysing).
       0.723
SDE90650.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.723
SDE90445.1
Hypothetical protein.
       0.698
SDE90473.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.698
SDE90522.1
Glycosyl transferase family 2.
       0.698
SDE90553.1
Glycosyltransferase, GT2 family.
       0.698
SDE17630.1
Magnesium chelatase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.648
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.636
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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