STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE96959.1ATP-binding cassette, subfamily C, CydD. (590 aa)    
Predicted Functional Partners:
SDE96940.1
ATP-binding cassette, subfamily C, CydC.
 
 
0.999
SDE97006.1
Cytochrome d ubiquinol oxidase subunit II.
 
  
 0.989
SDE97031.1
Cytochrome d ubiquinol oxidase subunit I.
  
 0.981
SDE05544.1
General L-amino acid transport system ATP-binding protein.
 
     
0.899
SDE16092.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.896
SDE61817.1
Peptide/nickel transport system ATP-binding protein/dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
   
0.893
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
    
0.869
SDE15927.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.847
SDE47524.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.788
SDE96981.1
Cyd operon protein YbgT.
  
  
 0.619
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.