STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE98311.1Hypothetical protein. (756 aa)    
Predicted Functional Partners:
SDE98422.1
ATP-binding cassette, subfamily C, LapB.
 
  
 0.826
SDE98394.1
ATP-binding cassette, subfamily C/ATP-binding cassette, subfamily C, LapB.
 
  
 0.814
SDE98367.1
HlyD family secretion protein/membrane fusion protein, adhesin transport system.
 
  
 0.788
SDE75125.1
T1SS-143 domain-containing protein.
 
0.762
SDE79359.1
ATP-binding cassette, subfamily C, LapB.
 
  
 0.752
SDE79335.1
Membrane fusion protein, adhesin transport system.
 
  
 0.678
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.593
SDE74507.1
Putative Ig domain-containing protein.
 
 0.582
SDD78579.1
Transglutaminase-like cysteine proteinase BTLCP.
 
   
 0.571
SDE79473.1
Outer membrane protein, adhesin transport system.
 
  
 0.527
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.