STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsARibose import ATP-binding protein RbsA. (550 aa)    
Predicted Functional Partners:
CDX14881.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.900
CDX14868.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.899
CDX14837.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.863
CDX14891.1
Putative sugar kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.733
fabG
3-oxoacyl-(acyl-carrier-protein) reductase FabG.
       0.705
fucA
L-fuculose-1-phosphate aldolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.592
CDX36323.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  0.591
rbsC-3
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  0.590
mglC
Methyl-galactoside transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  0.584
rbsC-2
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  0.561
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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