STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX30846.1Cytochrome P450. (1408 aa)    
Predicted Functional Partners:
CDX39206.1
Putative copper resistance protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.870
CDX39211.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.771
CDX36391.1
Putative Biotin biosynthesis cytochrome P450; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.744
CDX30844.1
Adenylate cyclase.
       0.565
CDX32292.1
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
  
  0.505
ephA
Epoxide hydrolase.
  
     0.425
CDX41953.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.400
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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