STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX31380.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (445 aa)    
Predicted Functional Partners:
CDX46729.1
Peptidase M23.
 
 
 
 0.812
CDX43834.1
Plasmid-related protein.
 
 
 
 0.794
ribB
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.717
CDX31383.1
DSBA oxidoreductase.
 
    0.696
CDX37878.1
GAF sensor hybrid histidine kinase.
    
 0.628
CDX46244.1
PAS sensor protein.
    
 0.581
CDX19177.1
Adenylate cyclase.
    
 0.579
CDX31280.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.575
CDX36469.1
Multi-sensor hybrid histidine kinase.
 
  
 0.563
CDX31377.1
Class I and II aminotransferase.
       0.555
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.