STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC-2D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. (327 aa)    
Predicted Functional Partners:
rbsA-3
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.907
CDX32731.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.891
CDX35382.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.825
CDX36321.1
Periplasmic binding protein/LacI transcriptional regulator.
  
  0.823
alsB
D-allose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  0.822
rbsB
Monosaccharide-transporting ATPase.
 
  0.780
ytfQ-2
Putative sugar transporter subunit: periplasmic-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  0.772
CDX36268.1
ABC-type sugar transport system periplasmic component-like protein.
  
  0.754
CDX39220.1
Periplasmic ribose-binding protein, sugar ABC transporter.
 
  0.736
CDX14837.1
Periplasmic binding protein/LacI transcriptional regulator.
  
  0.727
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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