STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC-3D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. (331 aa)    
Predicted Functional Partners:
CDX32731.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.860
rbsA-3
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.846
CDX35382.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  0.816
CDX36321.1
Periplasmic binding protein/LacI transcriptional regulator.
  
  0.805
alsB
D-allose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  0.800
ucpA
Putative oxidoredutase, sulfate metabolism protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
ytfQ-2
Putative sugar transporter subunit: periplasmic-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  0.733
CDX32759.1
SMP-30/Gluconolaconase/LRE domain protein.
    
  0.723
rbsB
Monosaccharide-transporting ATPase.
 
  0.719
CDX36268.1
ABC-type sugar transport system periplasmic component-like protein.
  
  0.718
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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