STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
omp2bPorin omp2b; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (395 aa)    
Predicted Functional Partners:
omp
25 kDa outer-membrane immunogenic protein.
  
 
 0.804
tolB
Periplasmic protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.785
CDX31703.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.772
CDX46900.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.770
CDX30866.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.769
omp-2
Outer membrane lipoprotein omp19 homolog.
  
     0.769
CDX24270.1
Kinesin-like protein.
  
     0.766
CDX27024.1
Porin.
  
 
 0.758
CDX44725.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.757
CDX34748.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.756
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.