STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX37584.1Calcium-binding protein. (292 aa)    
Predicted Functional Partners:
dgoK
2-oxo-3-deoxygalactonate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.913
dgoA
2-oxo-3-deoxygalactonate 6-phosphate aldolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.863
CDX37593.1
Short-chain dehydrogenase/reductase SDR.
 
  
  0.860
araA
L-arabinose 1-dehydrogenase.
 
 
  0.547
CDX37581.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.522
gntK
Gluconate kinase 2; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.474
CDX28929.1
Putative SMP-30/gluconolaconase/LRE-like region-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
  0.452
CDX43959.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
   0.426
flgF
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
    
   0.426
flgG
Flagellar component of cell-distal portion of basal-body rod; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.
    
   0.426
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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