STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX35582.1Uncharacterized short-chain type dehydrogenase/reductase y4eK. (236 aa)    
Predicted Functional Partners:
CDX35585.1
Uncharacterized short-chain type dehydrogenase/reductase y4eL.
 
  
  0.945
CDX45304.1
Uncharacterized short-chain type dehydrogenase/reductase y4eL.
  
  
  0.787
ycdF
Glucose 1-dehydrogenase 2.
  
  
  0.718
CDX19890.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.714
fabG-3
Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.699
CDX35588.1
LysR substrate-binding protein.
 
     0.662
CDX44262.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.656
CDX44176.1
Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.
    
  0.646
CDX35573.1
Short-chain dehydrogenase/reductase SDR.
 
  
 
0.610
CDX40538.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.603
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.