STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX36638.1TadE family protein. (197 aa)    
Predicted Functional Partners:
CDX36641.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.928
CDX36621.1
Response regulator receiver protein.
 
    0.917
CDX36635.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.899
CDX36626.1
Flp pilus assembly protein CpaB.
 
    0.870
CDX36629.1
Peptidase A24A prepilin type IV.
 
  
 0.868
CDX36632.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.862
CDX36623.1
Pilus biogenesis lipoprotein CpaD.
 
     0.808
CDX36617.1
Type II secretion system F domain protein.
 
  
 0.796
CDX24257.1
Hpt protein.
  
    0.782
CDX36612.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.778
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.