STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mocC-2Rhizopine catabolism protein MocC. (309 aa)    
Predicted Functional Partners:
CDX38478.1
Putative malonic semialdehyde oxidative decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the TPP enzyme family.
 
 
 0.991
idhA
Inositol 2-dehydrogenase.
 
 
  0.980
idhA-2
Inositol 2-dehydrogenase.
 
 
  0.978
iolB
5-deoxy-glucuronate isomerase.
 
  
 0.921
CDX38481.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.915
CDX38499.1
Sugar ABC transporter.
 
     0.892
CDX38487.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  0.848
CDX35846.1
Oxidoreductase domain protein.
 
  0.829
CDX38493.1
ABC-type transport system ATP-binding protein.
 
     0.822
CDX38496.1
Permease protein of sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    0.822
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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