STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX42405.1Transcriptional regulator, LuxR family. (862 aa)    
Predicted Functional Partners:
CDX37875.1
Putative sensor/response regulator hybrid protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.996
CDX34540.1
Hybrid sensory histidine kinase (fragment).
 
 
 0.976
CDX43935.1
Transcriptional regulator, LuxR family.
 
 0.975
CDX34852.1
FOG: PAS/PAC domain protein.
   
 0.973
CDX34860.1
ATPase domain-containing protein.
   
 0.973
CDX36469.1
Multi-sensor hybrid histidine kinase.
   
 0.973
CDX38782.1
Sensor kinase.
   
 0.973
CDX39476.1
Hypothetical protein; No homology to any previously reported sequences.
   
 0.973
CDX44780.1
Two-component sensor/response regulator hybrid.
   
 0.973
CDX37878.1
GAF sensor hybrid histidine kinase.
  
 0.971
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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