STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX42543.1Exported hypothetical protein; No homology to any previously reported sequences. (88 aa)    
Predicted Functional Partners:
CDX36469.1
Multi-sensor hybrid histidine kinase.
   
 0.893
CDX37875.1
Putative sensor/response regulator hybrid protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.893
CDX34540.1
Hybrid sensory histidine kinase (fragment).
   
 0.892
CDX34852.1
FOG: PAS/PAC domain protein.
   
 0.892
CDX34860.1
ATPase domain-containing protein.
   
 0.892
CDX38782.1
Sensor kinase.
   
 0.892
CDX39476.1
Hypothetical protein; No homology to any previously reported sequences.
   
 0.892
CDX44780.1
Two-component sensor/response regulator hybrid.
   
 0.892
rbsD
D-ribose pyranase 1; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.775
rbsC-9
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
  
  0.746
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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