STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX42864.1Pilus assembly protein. (387 aa)    
Predicted Functional Partners:
CDX42862.1
TadE family protein.
 
    0.970
CDX42848.1
Flp pilus assembly protein CpaB.
 
  
 0.960
CDX42836.1
Type II secretion system F domain protein.
 
  
 0.949
CDX28028.1
Type II secretion system F domain-containing protein.
 
  
 0.940
CDX36617.1
Type II secretion system F domain protein.
 
  
 0.939
CDX28037.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.935
CDX36626.1
Flp pilus assembly protein CpaB.
 
  
 0.929
CDX42851.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.922
CDX42833.1
Type II secretion system F domain protein.
 
  
 0.913
CDX42857.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.903
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.