Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDX42963.1 | CDX42966.1 | MPLDJ20_60062 | MPLDJ20_60063 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | OmpA/MotB domain protein. | 0.500 |
CDX42963.1 | CDX45853.1 | MPLDJ20_60062 | MPLDJ20_80065 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the ArsC family. | 0.453 |
CDX42963.1 | fabA | MPLDJ20_60062 | MPLDJ20_20656 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | Beta-hydroxydecanoyl thioester dehydrase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | 0.487 |
CDX42963.1 | mazG | MPLDJ20_60062 | MPLDJ20_140117 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | Nucleoside triphosphate pyrophosphohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.464 |
CDX42963.1 | rnd | MPLDJ20_60062 | MPLDJ20_140408 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.526 |
CDX42966.1 | CDX42963.1 | MPLDJ20_60063 | MPLDJ20_60062 | OmpA/MotB domain protein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | 0.500 |
CDX45853.1 | CDX42963.1 | MPLDJ20_80065 | MPLDJ20_60062 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the ArsC family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | 0.453 |
fabA | CDX42963.1 | MPLDJ20_20656 | MPLDJ20_60062 | Beta-hydroxydecanoyl thioester dehydrase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | 0.487 |
mazG | CDX42963.1 | MPLDJ20_140117 | MPLDJ20_60062 | Nucleoside triphosphate pyrophosphohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | 0.464 |
rnd | CDX42963.1 | MPLDJ20_140408 | MPLDJ20_60062 | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0260 family. | 0.526 |