STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06183.1Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: dsy:DSY3813 hypothetical protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Putative uncharacterized protein; IMG reference gene:2503574826; PFAM: MarR family. (208 aa)    
Predicted Functional Partners:
ftsH
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.529
AEB06184.1
COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836:IPR005904; KEGG: apv:Apar_0107 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: hypoxanthine phosphoribosyltransferase; IMG reference gene:2503574827; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.481
AEB06182.1
KEGG: apv:Apar_1313 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574825.
       0.434
AEB07687.1
YhgE/Pip N-terminal domain protein; COGs: COG1511 membrane protein; InterPro IPR013525:IPR017500:IPR017501; KEGG: blo:BL0138 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; IMG reference gene:2503576407; PFAM: ABC-2 type transporter; TIGRFAM: YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain.
 
     0.426
AEB06623.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: bll:BLJ_1199 GCN5-like N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575289; PFAM: Acetyltransferase (GNAT) family.
 
  
 0.424
AEB07686.1
YhgE/Pip N-terminal domain protein; COGs: COG1511 membrane protein; InterPro IPR013525:IPR017500:IPR017501; KEGG: bde:BDP_0048 putative membrane protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; TIGRFAM: YhgE/Pip N-terminal domain protein; YhgE/Pip C-terminal domain protein; IMG reference gene:2503576406; PFAM: Protein of unknown function (DUF3533); ABC-2 type transporter; TIGRFAM: YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain.
 
     0.414
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
  
  
 0.414
AEB06224.1
Helix-turn-helix domain protein; InterPro IPR001387:IPR013096; KEGG: cbl:CLK_0680 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574870; PFAM: Cupin domain; Helix-turn-helix.
 
 
 0.403
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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