STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06213.1SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: apv:Apar_1312 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574857; PFAM: SNARE associated Golgi protein. (222 aa)    
Predicted Functional Partners:
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.650
AEB06214.1
COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544:IPR005786; KEGG: ccu:Ccur_08670 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Putative uncharacterized protein; TIGRFAM: branched-chain amino acid aminotransferase; IMG reference gene:2503574858; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II.
     
 0.574
AEB06505.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: gva:HMPREF0424_0133 efflux ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575166; PFAM: Predicted permease.
  
  
 0.436
AEB06518.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ele:Elen_1535 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575182; PFAM: Predicted permease.
  
  
 0.436
AEB06520.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ele:Elen_1535 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575184; PFAM: Predicted permease.
  
  
 0.436
AEB07194.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ele:Elen_1535 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575885; PFAM: Predicted permease.
  
  
 0.436
AEB06195.1
Peptidase U61 LD-carboxypeptidase A; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: mta:Moth_0711 peptidase U61, LD-carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A; SPTR: Peptidase U61, LD-carboxypeptidase A; IMG reference gene:2503574839; PFAM: LD-carboxypeptidase.
  
    0.435
AEB06212.1
COGs: COG1045 Serine acetyltransferase; InterPro IPR018357:IPR001451:IPR005881; KEGG: lsp:Bsph_4643 serine acetyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: serine O-acetyltransferase; IMG reference gene:2503574856; TIGRFAM: serine O-acetyltransferase.
     
 0.423
AEB06211.1
NAD(P)H dehydrogenase (quinone); COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: tde:TDE0354 general stress protein 14; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: General stress protein 14; IMG reference gene:2503574855; PFAM: Flavodoxin-like fold.
     
 0.420
AEB06950.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR000103:IPR019575; KEGG: eel:EUBELI_00200 putative glutamate synthase (NADPH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: Putative uncharacterized protein; IMG reference gene:2503575630; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Pyridine nucleotide-disulphide oxidoreductase.
     
 0.414
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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