STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06253.1Aldose 1-epimerase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: apv:Apar_0645 aldose 1-epimerase; PFAM: Aldose 1-epimerase; SPTR: Putative uncharacterized protein; IMG reference gene:2503574900; PFAM: Aldose 1-epimerase. (297 aa)    
Predicted Functional Partners:
AEB07858.1
Galactokinase; COGs: COG0153 Galactokinase; InterProIPR000705:IPR006203:IPR019539:IPR006204:IPR 006206; KEGG: apv:Apar_0819 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain; PRIAM: Galactokinase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576583; PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain.
  
 
 0.709
AEB06252.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: ctc:CTC01842 putative regulator of efflux transporter; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; IMG reference gene:2503574899; PFAM: MerR, DNA binding; MerR family regulatory protein.
     
 0.569
prfA
Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
  
 0.448
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.