STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06303.1COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: bde:BDP_0088 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Putative uncharacterized protein; IMG reference gene:2503574951; PFAM: Polysaccharide deacetylase. (441 aa)    
Predicted Functional Partners:
AEB07123.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: apv:Apar_0835 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; IMG reference gene:2503575813; PFAM: Glycosyl transferase family 2.
  
  
 0.583
AEB07754.1
COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: apv:Apar_1343 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; PRIAM: Phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576475; PFAM: Protein phosphatase 2C.
 
    0.581
AEB06302.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ccu:Ccur_10670 predicted xylanase/chitin deacetylase; PFAM: polysaccharide deacetylase; SPTR: Putative uncharacterized protein; IMG reference gene:2503574950; PFAM: Polysaccharide deacetylase.
 
    
0.555
AEB06361.1
KEGG: eel:EUBELI_00627 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575013.
  
  
 0.538
AEB07756.1
COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635:IPR002290:IPR005543:IPR000719:IPR 017441:IPR008271:IPR017442; KEGG: apv:Apar_1345 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576477; PFAM: Protein kinase domain; PASTA domain.
 
  
 0.519
AEB06304.1
MgtE intracellular region; COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644:IPR006668; KEGG: apv:Apar_0069 MgtE intracellular region; PFAM: MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574952; PFAM: MgtE intracellular N domain; CBS domain; TIGRFAM: Mg2+ transporter (mgtE).
       0.508
AEB06301.1
KEGG: apv:Apar_0067 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574949.
      0.438
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.426
AEB06300.1
KEGG: apv:Apar_0066 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574948.
  
    0.424
AEB06777.1
Glycosyl transferase, family 4, conserved region; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480:IPR018481; KEGG: apv:Apar_0525 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Putative uncharacterized protein; IMG reference gene:2503575452; PFAM: Glycosyl transferase family 4.
 
   
 0.424
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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