STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06339.11-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: shi:Shel_26880 NCAIR mutase-like protein; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Putative uncharacterized protein; IMG reference gene:2503574991; PFAM: AIR carboxylase. (256 aa)    
Predicted Functional Partners:
larC
Protein of unknown function DUF111; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.980
AEB06207.1
COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; InterPro IPR017969; KEGG: pca:Pcar_2431 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574851; TIGRFAM: TIGR00268 family protein.
  
 0.961
AEB06338.1
KEGG: mjl:Mjls_3056 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574990.
       0.542
AEB06341.1
Cna B domain protein; InterPro IPR008454; KEGG: ccu:Ccur_00830 Cna protein B-type domain-containing protein; PFAM: Cna B domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574993; PFAM: Cna protein B-type domain.
       0.498
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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