STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06360.1COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cpy:Cphy_2887 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2503575012; PFAM: Glycosyl transferase family 2. (253 aa)    
Predicted Functional Partners:
AEB06361.1
KEGG: eel:EUBELI_00627 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575013.
  
  
 0.852
AEB07233.1
KEGG: ele:Elen_2055 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575930; PFAM: Uncharacterized conserved protein (DUF2304).
 
   
 0.617
AEB07231.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: san:gbs1480 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; manually curated; IMG reference gene:2503575928; PFAM: Glycosyl transferases group 1.
 
  
 0.491
AEB07222.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.481
AEB06362.1
Protein of unknown function DUF151; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: apv:Apar_0008 protein of unknown function DUF151; PFAM: protein of unknown function DUF151; SPTR: Putative uncharacterized protein; IMG reference gene:2503575014; PFAM: Uncharacterised ACR, COG1259.
       0.450
AEB07227.1
Protein of unknown function DUF2142, membrane; COGs: COG4713 membrane protein; InterPro IPR018674; KEGG: cac:CA_C0024 hypothetical protein; PFAM: Protein of unknown function DUF2142, membrane; SPTR: Putative uncharacterized protein; IMG reference gene:2503575924; PFAM: Predicted membrane protein (DUF2142).
 
   
 0.448
AEB07226.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: ele:Elen_2042 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; IMG reference gene:2503575923; PFAM: Glycosyl transferase family 2.
 
  
 0.403
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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