STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06386.1Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: ele:Elen_2734 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503575039; PFAM: Bacterial regulatory proteins, tetR family. (245 aa)    
Predicted Functional Partners:
AEB06387.1
InterPro IPR011701; KEGG: ele:Elen_2733 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Permeases of the major facilitator superfamily; IMG reference gene:2503575040; PFAM: Major Facilitator Superfamily.
 
  
 0.880
AEB06161.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551:IPR010499; KEGG: dhd:Dhaf_2598 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; SPTR: Transcriptional regulator; IMG reference gene:2503574802; PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain.
 
   
 0.720
AEB06385.1
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: ere:EUBREC_3362 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575038; PFAM: Acetyltransferase (GNAT) family.
 
  
 0.718
AEB07825.1
KEGG: shi:Shel_25980 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2503576549; PFAM: Protein of unknown function (DUF2992).
 
     0.706
AEB07764.1
KEGG: ele:Elen_0079 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576485.
 
   
 0.587
AEB06518.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ele:Elen_1535 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575182; PFAM: Predicted permease.
 
   
 0.571
AEB06520.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ele:Elen_1535 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575184; PFAM: Predicted permease.
 
   
 0.555
AEB06384.1
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ele:Elen_0682 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; IMG reference gene:2503575037; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
     
 0.543
AEB07194.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ele:Elen_1535 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; IMG reference gene:2503575885; PFAM: Predicted permease.
 
   
 0.537
AEB06383.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ele:Elen_0683 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575036; PFAM: ABC transporter.
 
   
 0.536
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.