STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06411.1Asparaginase; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR020827:IPR006034; KEGG: ele:Elen_0759 L-asparaginase, type I; PFAM: Asparaginase/glutaminase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575064; PFAM: Asparaginase. (429 aa)    
Predicted Functional Partners:
AEB06660.1
Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839:IPR004838:IPR001176; KEGG: tye:THEYE_A0342 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Putative uncharacterized protein; IMG reference gene:2503575328; PFAM: Aminotransferase class I and II.
    
 0.920
AEB06839.1
COGs: COG1794 Aspartate racemase; InterPro IPR018187:IPR015942:IPR004380; KEGG: pjd:Pjdr2_3258 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Putative uncharacterized protein; TIGRFAM: aspartate racemase; IMG reference gene:2503575514; PFAM: Asp/Glu/Hydantoin racemase.
    
 0.917
AEB06288.1
COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583:IPR001962:IPR006426:IPR017932; KEGG: lsp:Bsph_4225 asparagine synthetase [glutamine-hydrolyzing] 1; PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: Putative uncharacterized protein; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); IMG reference gene:2503574936; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
    
 0.914
pyrB
COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR002082:IPR006130:IPR006132:IPR006131; KEGG: shi:Shel_11850 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; IMG reference gene:2503575829; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransfe [...]
    
 0.913
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.900
panD
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.847
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.731
tsaD
(SSU ribosomal protein S18P)-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
  
 0.499
AEB06420.1
COGs: COG3681 conserved hypothetical protein; InterPro IPR021144; KEGG: bpo:BP951000_1867 hypothetical protein; SPTR: UPF0597 protein RUMGNA_00647; IMG reference gene:2503575077; PFAM: Serine dehydratase alpha chain; Belongs to the UPF0597 family.
 
     0.486
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
    0.442
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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