STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06418.1Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR004841:IPR002293; KEGG: tde:TDE0445 amino acid permease; PFAM: amino acid permease-associated region; SPTR: Amino acid permease; IMG reference gene:2503575075; PFAM: Amino acid permease; TC 2.A.3. (432 aa)    
Predicted Functional Partners:
AEB07182.1
COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385:IPR006589:IPR006047; KEGG: apv:Apar_1046 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Putative uncharacterized protein; TIGRFAM: 4-alpha-glucanotransferase; IMG reference gene:2503575873; PFAM: 4-alpha-glucanotransferase; Alpha amylase, catalytic domain; TIGRFAM: 4-alpha-glucanotransferase.
  
 0.946
AEB06893.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: apv:Apar_1336 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Trehalose-6-phosphate hydrolase; IMG reference gene:2503575568; PFAM: Alpha amylase, catalytic domain; TIGRFAM: alpha,alpha-phosphotrehalase.
  
 0.943
AEB06419.1
Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR011697:IPR017926; KEGG: cdf:CD1188 putative glutamine amidotransferase; PFAM: peptidase C26; SPTR: Class I glutamine amidotransferase; IMG reference gene:2503575076; PFAM: Peptidase C26.
 
  
 0.880
AEB06420.1
COGs: COG3681 conserved hypothetical protein; InterPro IPR021144; KEGG: bpo:BP951000_1867 hypothetical protein; SPTR: UPF0597 protein RUMGNA_00647; IMG reference gene:2503575077; PFAM: Serine dehydratase alpha chain; Belongs to the UPF0597 family.
     
 0.725
AEB06926.1
NADH:flavin oxidoreductase/NADH oxidase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR013027:IPR001155:IPR001327; KEGG: clj:CLJU_c29840 enoate reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575606; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.
 
 
 0.564
AEB06565.1
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR000873:IPR020845:IPR010071; KEGG: shi:Shel_17200 non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Non-ribosomal peptide synthetase modules and related proteins; TIGRFAM: amino acid adenylation domain protein; IMG reference gene:2503575229; PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain.
 
 
 0.542
AEB07829.1
Sodium/hydrogen exchanger; COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component; InterPro IPR003148:IPR006037:IPR006153; KEGG: chl:Chy400_3708 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: Sodium/hydrogen exchanger; IMG reference gene:2503576553; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.524
AEB07174.1
COGs: COG1454 Alcohol dehydrogenase class IV; InterProIPR012079:IPR000408:IPR018211:IPR015590:IPR 001670; KEGG: eel:EUBELI_02054 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575865; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.522
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.521
arcA
COGs: COG2235 Arginine deiminase; InterPro IPR003876:IPR003198; KEGG: shi:Shel_02360 arginine deiminase; PFAM: amidinotransferase; PRIAM: Arginine deiminase; SPTR: Arginine deiminase; TIGRFAM: arginine deiminase; IMG reference gene:2503575537; PFAM: Amidinotransferase; TIGRFAM: arginine deiminase.
  
  
 0.511
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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