STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06420.1COGs: COG3681 conserved hypothetical protein; InterPro IPR021144; KEGG: bpo:BP951000_1867 hypothetical protein; SPTR: UPF0597 protein RUMGNA_00647; IMG reference gene:2503575077; PFAM: Serine dehydratase alpha chain; Belongs to the UPF0597 family. (424 aa)    
Predicted Functional Partners:
AEB06418.1
Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR004841:IPR002293; KEGG: tde:TDE0445 amino acid permease; PFAM: amino acid permease-associated region; SPTR: Amino acid permease; IMG reference gene:2503575075; PFAM: Amino acid permease; TC 2.A.3.
     
 0.725
AEB06419.1
Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR011697:IPR017926; KEGG: cdf:CD1188 putative glutamine amidotransferase; PFAM: peptidase C26; SPTR: Class I glutamine amidotransferase; IMG reference gene:2503575076; PFAM: Peptidase C26.
       0.725
AEB06342.1
Phosphodiesterase, MJ0936 family; COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: apv:Apar_0076 phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; TIGRFAM: phosphodiesterase, MJ0936 family; IMG reference gene:2503574994; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family.
  
     0.581
AEB06220.1
KEGG: ele:Elen_2502 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503574866.
 
     0.493
AEB06411.1
Asparaginase; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR020827:IPR006034; KEGG: ele:Elen_0759 L-asparaginase, type I; PFAM: Asparaginase/glutaminase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575064; PFAM: Asparaginase.
 
     0.486
AEB07341.1
Selenium metabolism protein YedF; InterPro IPR001455:IPR019870; KEGG: ere:EUBREC_3158 hypothetical protein; PFAM: SirA-like domain-containing protein; SPTR: Selenium metabolism protein YedF; TIGRFAM: selenium metabolism protein YedF; IMG reference gene:2503576047; PFAM: DsrE/DsrF-like family; SirA-like protein; TIGRFAM: selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
     0.440
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.