STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06427.1KEGG: syn:slr0121 hypothetical protein; IMG reference gene:2503575085. (68 aa)    
Predicted Functional Partners:
AEB06428.1
Transcriptional regulator, XRE family; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: cby:CLM_0683 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Conserved domain protein; IMG reference gene:2503575086; PFAM: Helix-turn-helix.
       0.565
AEB06429.1
KEGG: eat:EAT1b_1420 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575087.
       0.543
AEB06426.1
Protein of unknown function DUF159; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: shi:Shel_04880 hypothetical protein; PFAM: protein of unknown function DUF159; SPTR: Uncharacterized conserved protein; IMG reference gene:2503575084; PFAM: Uncharacterised ACR, COG2135; Belongs to the SOS response-associated peptidase family.
       0.519
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.