STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06436.1Beta-glucuronidase; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103:IPR006101; KEGG: pjd:Pjdr2_4080 beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-glucuronidase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575094; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain. (733 aa)    
Predicted Functional Partners:
AEB07485.1
Hypothetical protein; COGs: COG3345 Alpha-galactosidase; KEGG: shi:Shel_06470 alpha-galactosidase; SPTR: Alpha-galactosidase; IMG reference gene:2503576200; PFAM: Melibiase.
 
 
 0.942
AEB07635.1
COGs: COG1874 Beta-galactosidase; InterPro IPR001944; KEGG: smb:smi_0079 beta-galactosidase 3; PFAM: glycoside hydrolase family 35; PRIAM: Beta-galactosidase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576355; PFAM: Glycosyl hydrolases family 35.
 
 0.940
AEB06229.1
Glycoside hydrolase family 2 TIM barrel; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR000629:IPR006101:IPR006104:IPR006102:IPR 006103:IPR004199; KEGG: blt:Balat_0268 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; SPTR: Beta-galactosidase; IMG reference gene:2503574875; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain [...]
  
  
 
0.926
AEB06484.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.923
AEB06435.1
Major facilitator superfamily MFS_1; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: smf:Smon_1309 Na+/melibiose symporter and related transporter-like protein; PFAM: major facilitator superfamily MFS_1; SPTR: Na+/melibiose symporter and related transporters; IMG reference gene:2503575093; PFAM: Major Facilitator Superfamily.
 
  
 0.918
AEB07575.1
Glucokinase; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: apv:Apar_0320 ROK family protein; PFAM: ROK family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576294; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).
    
 0.912
AEB07799.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: bcl:ABC1731 glucokinase; PFAM: ROK family protein; SPTR: Glucokinase; IMG reference gene:2503576523; PFAM: ROK family.
    
 0.912
AEB06437.1
Aryl-beta-glucosidase; COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360; KEGG: ach:Achl_0421 glycoside hydrolase family 1; PFAM: glycoside hydrolase family 1; SPTR: Beta-glucosidase; IMG reference gene:2503575095; PFAM: Glycosyl hydrolase family 1.
 
   
 0.857
AEB06433.1
Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR000421:IPR006710:IPR022272; KEGG: cmi:CMM_0103 beta-xylosidase glycosyl hydrolase family 43; PFAM: glycoside hydrolase family 43; coagulation factor 5/8 type domain protein; SPTR: Putative beta-xylosidase, glycosyl hydrolase family 43; IMG reference gene:2503575091; PFAM: F5/8 type C domain; Glycosyl hydrolases family 43.
 
   
 0.841
AEB06432.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: csc:Csac_0600 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative sugar phosphate isomerasesiderophore/epimerase; IMG reference gene:2503575090; PFAM: Xylose isomerase-like TIM barrel.
 
   
 0.827
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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