STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06439.1Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: lbr:LVIS_0145 transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: Putative uncharacterized protein; IMG reference gene:2503575097; PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (224 aa)    
Predicted Functional Partners:
AEB06668.1
COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: lrh:LGG_00057 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; SPTR: Fructuronate reductase; IMG reference gene:2503575336; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain.
 
   
 0.767
AEB06674.1
Sugar transport symporter; COGs: COG2211 Na+/melibiose symporter and related transporter; KEGG: lla:L113994 sugar transport symporter; SPTR: Sugar transport symporter; IMG reference gene:2503575343.
 
   
 0.669
AEB06438.1
Regulatory protein TetR; InterPro IPR001647; KEGG: cac:CA_C0724 AcrR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Prophage Sa05, transcriptional regulator, putative; IMG reference gene:2503575096; PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.663
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.571
AEB06569.1
InterPro IPR011701; KEGG: rsl:RPSI07_mp0928 putative major facilitator superfamily multidrug transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503575233; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
  
  
 0.509
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
   
   0.503
AEB06662.1
Major facilitator superfamily MFS_1; InterPro IPR011701:IPR005829; KEGG: bfa:Bfae_28350 arabinose efflux permease family protein; PFAM: major facilitator superfamily MFS_1; SPTR: Transporter, major facilitator family; IMG reference gene:2503575330; PFAM: Major Facilitator Superfamily.
 
   
 0.497
uxaC
COGs: COG1904 Glucuronate isomerase; InterPro IPR003766; KEGG: lsa:LSA0129 glucuronate isomerase; PFAM: Glucuronate isomerase; PRIAM: Glucuronate isomerase; SPTR: Glucuronate isomerase; IMG reference gene:2503575338; PFAM: Glucuronate isomerase.
 
   
 0.496
AEB06440.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: azl:AZL_e02380 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575098; PFAM: Helix-turn-helix.
     
 0.471
AEB07765.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: efa:EF0438 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: AP endonuclease; IMG reference gene:2503576486; PFAM: Xylose isomerase-like TIM barrel.
 
     0.436
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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