STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06444.1Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: ske:Sked_03890 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503575102; PFAM: Bacterial regulatory proteins, lacI family; family. (337 aa)    
Predicted Functional Partners:
AEB06694.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: bsu:BSU22120 Kdg operon transcriptional regulator (LacI family); PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; IMG reference gene:2503575363; PFAM: Bacterial regulatory proteins, lacI family; family.
  
     0.774
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.598
AEB06443.1
oligosaccharide/H+ symporter, major facilitator superfamily (MFS); InterPro IPR020480:IPR000576; KEGG: bfa:Bfae_28670 galactoside permease; SPTR: Oligosaccharide:H+ symporter; TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); IMG reference gene:2503575101; PFAM: LacY proton/sugar symporter; TIGRFAM: oligosaccharide:H+ symporter.
     
 0.557
AEB07217.1
COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698:IPR000032; KEGG: shi:Shel_13270 phosphotransferase system HPr (HPr) family protein; PFAM: phosphoryl transfer system HPr; SPTR: Putative uncharacterized protein; TIGRFAM: phosphocarrier, HPr family; IMG reference gene:2503575912; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
   
 
 0.546
AEB07278.1
COGs: COG1925 Phosphotransferase system HPr-related protein; InterProIPR005698:IPR001020:IPR002114:IPR018228:IPR 000032; KEGG: sth:STH955 PTS system phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; SPTR: Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; IMG reference gene:2503575978; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
   
 
 0.546
AEB07539.1
COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698:IPR000032; KEGG: bll:BLJ_0238 phosphotransferase system, phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; SPTR: Putative uncharacterized protein; TIGRFAM: phosphocarrier, HPr family; IMG reference gene:2503576258; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
   
 
 0.546
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
 
 0.512
pheT
COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR004532:IPR002547:IPR005121:IPR005146:IPR 005147; KEGG: apv:Apar_1054 phenylalanyl-tRNA synthetase, beta subunit; PFAM: B3/4 domain protein; t-RNA-binding domain-containing protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Putative uncharacterized protein; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; IMG reference gene:2503576306; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta su [...]
   
 
 0.498
AEB06441.1
COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015794:IPR001697; KEGG: apv:Apar_1040 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; IMG reference gene:2503575099; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.474
AEB06442.1
Alpha-N-arabinofuranosidase; COGs: COG3940 beta-xylosidase; InterPro IPR006710; KEGG: ske:Sked_03050 predicted beta-xylosidase; PFAM: glycoside hydrolase family 43; PRIAM: Alpha-N-arabinofuranosidase; SPTR: Predicted beta-xylosidase; IMG reference gene:2503575100; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
     
 0.439
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.