STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06456.1Flp pilus assembly protein CpaB; InterPro IPR013974:IPR017592; KEGG: ele:Elen_0535 Flp pilus assembly protein CpaB; PFAM: SAF domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: Flp pilus assembly protein CpaB; IMG reference gene:2503575116; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB. (223 aa)    
Predicted Functional Partners:
AEB06460.1
InterPro IPR018076; KEGG: apv:Apar_1032 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; IMG reference gene:2503575120; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.960
AEB06459.1
Type II secretion system F domain protein; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: apv:Apar_1033 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; IMG reference gene:2503575119; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.959
AEB06458.1
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482:IPR017975; KEGG: apv:Apar_1034 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: Putative uncharacterized protein; IMG reference gene:2503575118; PFAM: Type II/IV secretion system protein.
 
  
 0.939
AEB06461.1
Hypothetical protein; KEGG: ccu:Ccur_13130 class III signal peptide-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575121.
  
  
 0.923
AEB06464.1
KEGG: apv:Apar_1028 TadE family protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575124; PFAM: TadE-like protein.
  
  
 0.896
AEB06457.1
Hypothetical protein; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: apv:Apar_1035 chromosome partitioning ATPase-like protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575117; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
    0.861
AEB07343.1
InterPro IPR002645:IPR003594; KEGG: apv:Apar_0915 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; ATP-binding region ATPase domain protein; SPTR: Anti-sigma factor antagonist; IMG reference gene:2503576052; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; STAS domain; TIGRFAM: anti-anti-sigma factor.
 
    0.822
AEB06830.1
KEGG: ele:Elen_2265 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575505.
 
    0.787
AEB06965.1
InterPro IPR013026:IPR019734:IPR001440; KEGG: apv:Apar_0669 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575646; PFAM: Tetratricopeptide repeat.
 
     0.787
AEB06462.1
KEGG: cre:CHLREDRAFT_187114 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575122.
       0.771
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.