STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06481.1L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (498 aa)    
Predicted Functional Partners:
AEB06483.1
COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: apv:Apar_0330 L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; SPTR: L-ribulose-5-phosphate 4-epimerase; IMG reference gene:2503575144; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
 
 0.992
AEB06909.1
Class II aldolase/adducin family protein; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: pjd:Pjdr2_1890 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: Class II aldolase/adducin family protein; IMG reference gene:2503575586; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
  
 
 0.906
AEB06482.1
Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: pru:PRU_0419 carbohydrate kinase domain-containing protein; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Ribulokinase; IMG reference gene:2503575143; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
  
 0.861
AEB07665.1
Alpha-N-arabinofuranosidase; COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: gtn:GTNG_1791 alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; PRIAM: Alpha-N-arabinofuranosidase; SMART: alpha-L-arabinofuranosidase domain protein; SPTR: Alpha-N-arabinofuranosidase; IMG reference gene:2503576385; PFAM: Alpha-L-arabinofuranosidase C-terminus.
  
 
 0.853
AEB06433.1
Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR000421:IPR006710:IPR022272; KEGG: cmi:CMM_0103 beta-xylosidase glycosyl hydrolase family 43; PFAM: glycoside hydrolase family 43; coagulation factor 5/8 type domain protein; SPTR: Putative beta-xylosidase, glycosyl hydrolase family 43; IMG reference gene:2503575091; PFAM: F5/8 type C domain; Glycosyl hydrolases family 43.
  
 
 0.845
AEB06675.1
Xylan 1,4-beta-xylosidase; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: llk:LLKF_1625 beta-1,4-xylosidase; PFAM: glycoside hydrolase family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Beta-1,4-xylosidase; IMG reference gene:2503575344; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.845
AEB07773.1
Xylan 1,4-beta-xylosidase; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: scl:sce4884 xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Xylan beta-1,4-xylosidase; IMG reference gene:2503576495; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.845
AEB07796.1
Xylan 1,4-beta-xylosidase; COGs: COG3507 Beta-xylosidase; InterPro IPR018247:IPR006710; KEGG: llc:LACR_1291 beta-xylosidase; PFAM: glycoside hydrolase family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Beta-xylosidase; IMG reference gene:2503576518; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 
 0.845
AEB07803.1
Transcriptional regulator, AraC family; COGs: COG3664 Beta-xylosidase; InterPro IPR018060:IPR000005:IPR000514; KEGG: aoe:Clos_0056 AraC family transcriptional regulator; PFAM: glycoside hydrolase family 39; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Predicted protein; IMG reference gene:2503576527; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Glycosyl hydrolases family 39.
    
 0.825
AEB06479.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR017871:IPR018171:IPR003593; KEGG: cno:NT01CX_0164 ribose transport ATP-binding protein RbsA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575140; PFAM: ABC transporter.
  
  
 0.694
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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