Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AEB06485.1Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: apv:Apar_0150 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; IMG reference gene:2503575146; PFAM: Bacterial regulatory proteins, lacI family; family. (335 aa)    
Predicted Functional Partners:
AEB06208.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: kra:Krad_0114 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; IMG reference gene:2503574852; PFAM: Bacterial regulatory proteins, lacI family; family.
  
     0.775
AEB06694.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: bsu:BSU22120 Kdg operon transcriptional regulator (LacI family); PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; IMG reference gene:2503575363; PFAM: Bacterial regulatory proteins, lacI family; family.
  
     0.773
AEB07769.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: spp:SPP_0363 sugar binding transcriptional regulator RegR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Sugar binding transcriptional regulator RegR; IMG reference gene:2503576491; PFAM: Bacterial regulatory proteins, lacI family; family.
  
     0.773
AEB06468.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: eat:EAT1b_0189 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Putative uncharacterized protein; IMG reference gene:2503575128; PFAM: Bacterial regulatory proteins, lacI family; family.
  
     0.769
AEB06484.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
 0.707
AEB07712.1
Hypothetical protein; COGs: COG2407 L-fucose isomerase and related protein; KEGG: lmy:LM5923_1067 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576432.
 
   
 0.511
AEB06486.1
COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterPro IPR001967:IPR018044; KEGG: shi:Shel_13430 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; SPTR: Putative uncharacterized protein; IMG reference gene:2503575147; PFAM: D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
       0.479
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.464
AEB07217.1
COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698:IPR000032; KEGG: shi:Shel_13270 phosphotransferase system HPr (HPr) family protein; PFAM: phosphoryl transfer system HPr; SPTR: Putative uncharacterized protein; TIGRFAM: phosphocarrier, HPr family; IMG reference gene:2503575912; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
   
 
 0.447
AEB07278.1
COGs: COG1925 Phosphotransferase system HPr-related protein; InterProIPR005698:IPR001020:IPR002114:IPR018228:IPR 000032; KEGG: sth:STH955 PTS system phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; SPTR: Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; IMG reference gene:2503575978; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
   
 
 0.447
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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