STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06491.1Regulatory protein MarR; InterPro IPR000835; KEGG: sga:GALLO_1286 putative transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Putative uncharacterized protein; IMG reference gene:2503575152. (162 aa)    
Predicted Functional Partners:
AEB06489.1
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR001140:IPR017871:IPR 003593; KEGG: sth:STH2015 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575150; PFAM: ABC transporter; ABC transporter transmembrane region.
  
  
 0.656
AEB06490.1
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439:IPR017940:IPR001140:IPR017871:IPR 003593; KEGG: clj:CLJU_c26230 putative transport protein ATPase/permease; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; IMG reference gene:2503575151; PFAM: ABC transporter transmembrane region; ABC transporter.
  
  
 0.656
AEB07858.1
Galactokinase; COGs: COG0153 Galactokinase; InterProIPR000705:IPR006203:IPR019539:IPR006204:IPR 006206; KEGG: apv:Apar_0819 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain; PRIAM: Galactokinase; SPTR: Putative uncharacterized protein; IMG reference gene:2503576583; PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain.
 
   
 0.635
AEB07884.1
COGs: COG4509 conserved hypothetical protein; KEGG: ele:Elen_0908 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503576613; PFAM: Sortase family.
  
     0.589
AEB06811.1
KEGG: ele:Elen_1466 YolD-like protein; SPTR: Putative uncharacterized protein; IMG reference gene:2503575486.
  
     0.490
AEB06492.1
COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: ssp:SSP0306 putative acetyltransferase; SPTR: Galactoside O-acetyltransferase; IMG reference gene:2503575153; PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats).
     
 0.437
AEB07747.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896:IPR011895:IPR017900:IPR002880:IPR 019752:IPR019456:IPR011766; KEGG: apv:Apar_1328 pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; [...]
  
  
 0.414
AEB07392.1
Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ccu:Ccur_01120 Fe2+/Zn2+ uptake regulation protein; PFAM: ferric-uptake regulator; SPTR: Putative uncharacterized protein; IMG reference gene:2503576102; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
 
  
 0.412
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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