STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB06601.1KEGG: apv:Apar_0328 FG-GAP repeat protein; SPTR: FG-GAP repeat protein; IMG reference gene:2503575266. (351 aa)    
Predicted Functional Partners:
AEB06600.1
PTS system IIB component, L-Asc family; InterPro IPR003501; KEGG: apv:Apar_0327 phosphotransferase system lactose/cellobiose-specific IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: Phosphotransferase system lactose/cellobiose-specific IIB subunit; IMG reference gene:2503575265; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TC 4.A.7.
 
     0.915
AEB06602.1
L-ascorbate 6-phosphate lactonase; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: apv:Apar_0329 putative L-ascorbate 6-phosphate lactonase; SPTR: Putative L-ascorbate 6-phosphate lactonase; IMG reference gene:2503575267.
 
     0.906
AEB06603.1
COGs: COG3623 Putative L-xylulose-5-phosphate 3-epimerase; InterPro IPR012307:IPR004560; KEGG: apv:Apar_0331 putative L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: L-ribulose-5-phosphate 3-epimerase; SPTR: Hexulose-6-phosphate isomerase; TIGRFAM: hexulose-6-phosphate isomerase; IMG reference gene:2503575268; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hexulose-6-phosphate isomerase, putative.
 
     0.869
AEB06599.1
PTS system IIC component, L-Asc family; COGs: COG3037 conserved hypothetical protein; KEGG: apv:Apar_0326 PTS system ascorbate-specific transporter subunit IIC; SPTR: Putative sugar-specific permease SgaT/UlaA; IMG reference gene:2503575264; PFAM: PTS system sugar-specific permease component; TC 4.A.7.
 
     0.853
AEB07614.1
Putative L-ascorbate 6-phosphate lactonase; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; InterPro IPR001202; KEGG: lrl:LC705_00435 putative L-ascorbate 6-phosphate lactonase; SPTR: Probable L-ascorbate-6-phosphate lactonase UlaG; IMG reference gene:2503576334.
 
     0.785
AEB06598.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: apv:Apar_0325 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Putative PTS IIA-like nitrogen-regulatory protein PtsN; IMG reference gene:2503575263; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
     0.640
AEB06597.1
Transcriptional regulator, DeoR family; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036:IPR018356; KEGG: apv:Apar_0324 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, DeoR family; IMG reference gene:2503575262; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain.
 
     0.403
Your Current Organism:
Coriobacterium glomerans
NCBI taxonomy Id: 700015
Other names: C. glomerans PW2, Coriobacterium glomerans DSM 20642, Coriobacterium glomerans PW2, Coriobacterium glomerans str. PW2, Coriobacterium glomerans strain PW2
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